E2O 10th meeting 20210519

E2O 10th meeting 20210519

Date

2021-05-19 16.00 UTC

Zoom Details





Attendees

@Jim Campbell @Jim Case @Former user (Deleted) @Yongsheng Gao @Steven Dain

Apologies

@Alejandro Lopez Osornio

Objectives

  • Continue to elaborate the migration model for laboratory measurement procedures

Discussion items

Description

Time

Owner

Notes

Action

Description

Time

Owner

Notes

Action

1

Welcome



@Daniel Karlsson

2

Conflicts of interest



@Daniel Karlsson





3

Discussion Phase 1 scope and template  development

57 min

@Daniel Karlsson @Jim Campbell

Going forward:

  • Document script and decisions made

  • Panels - identification, naming and implementation

  • Totals - identification of corresponding concepts

  • What are valuable groupers

Task-force to prepare for business meetings: @Jim Campbell @Former user (Deleted)  @Penni Hernandez @Rob Hausam @Daniel Karlsson

2021-05-19:

To add DIRECT SITE or not: 

Agreement that a DIRECT SITE would not be added to the definition unless it is clearly stated in the FSN. Further, INHERES IN would generally take values from the Substance hierarchy.

To model INHERE_IN with substance or specimen:  JCase demurred after substantial discussion and we agreed to use substance...

Being able to use the SNOMED CT hierarchy to organize observables (lab as deployed in Nebraska and the tech preview or "non-lab" as deployed in SNOMED CT Evaluation procedure and Observables hierarchies) for analytics, querying, etc. is the driving use case.  Discussion on structured FSN for transferred procedures did not reach conclusion.

WorkPlan: continue with process evaluation of Serum procedures:

1) detailed review of 800+ concepts in set with removal of Orderables

2) editorial review of template based modelling of set for URU verification

3) Prepare more in-depth analysis for meeting in two weeks. 

1

4

Next meeting 

2 min

@Daniel Karlsson

2021-06-02 16.00 UTC



5

AOB

1 min

@Daniel Karlsson





Meeting Files

  File Modified

Microsoft Excel Spreadsheet E2O_Phase1_Scope_100_UK_concepts_aligned20210208-panels_pmh_JK_Excluded(002).xlsx

2021-May-19 by Daniel Karlsson

ZIP Archive e2o_observables_edit.zip

2021-May-19 by Daniel Karlsson

File e2o_v3.owl

2021-May-19 by Daniel Karlsson

Microsoft Excel Spreadsheet E2O_Phase1_Scope.xlsx

2021-May-19 by Daniel Karlsson

Microsoft Word Document Migration of Evaluation Procedures to Observables Inception-Elaboration.docx

2021-May-19 by Daniel Karlsson

ZIP Archive SNOMEDCT_NEBRASKALEXICON_LOINC20210326.zip

2021-May-19 by Daniel Karlsson

Microsoft Excel Spreadsheet E2O_Phase1_Scope_UK_concepts_aligned20210208.xlsx

2021-May-19 by Daniel Karlsson

File e2o.owl

2021-May-19 by Daniel Karlsson

Microsoft Excel Spreadsheet E2O_Procedure_Concepts.xlsx

2021-May-19 by Daniel Karlsson

Microsoft Excel Spreadsheet E2O_Phase1_Scope_100_UK_concepts_aligned20210208.xlsx

2021-May-19 by Daniel Karlsson

Microsoft Powerpoint Presentation Semantic Interoperation of Lab with SNOMED CT20210105.pptx

2021-May-19 by Daniel Karlsson

ZIP Archive SNOMEDCT_NEBRASKALEXICON_LOINC20210326_noplasma.zip

2021-May-19 by Daniel Karlsson

ZIP Archive e2o_serum_v2noplasma2.zip

2021-May-19 by Daniel Karlsson

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