SNOMED CT March 2020 International Edition - SNOMED International Release notes

SNOMED CT March 2020 International Edition - SNOMED International Release notes





Release Date

20200309

Release Status

INTERIM PRODUCTION RELEASE

Document Version

1.0

 





Introduction

Background

SNOMED CT terminology provides a common language that enables a consistent way of indexing, storing, retrieving, and aggregating clinical data across specialties and sites of care.

SNOMED International maintains the SNOMED CT technical design, the content architecture, the SNOMED CT content (includes the concepts table, the descriptions table, the relationships table, a history table, and ICD mappings), and related technical documentation.

Purpose

This document provides a summarized description of the content changes included in the March 2020 INTERIM release of SNOMED Clinical Terms® (SCT) International Release.

It also includes technical notes detailing the known issues which have been identified and agreed to be released. These are content or technical issues where the root cause is understood, and the fix has been discussed and agreed, but has yet to be implemented.

The SNOMED International Release Notes are available alongside the INTERIM March 2020 International Edition release.

Scope

This document is written for the purpose described above and is not intended to provide details of the technical specifications for SNOMED CT or encompass every change made during the release.

Audience

The audience includes National Release Centers, WHO-FIC release centers, vendors of electronic health records, terminology developers and managers who wish to have an understanding of changes that have been incorporated into the INTERIM March 2020 International Edition release.



Content Development Activity

Summary

This INTERIM International Edition Release has been created as part of the ongoing global effort to tackle the Coronavirus outbreak, and as such includes the updated Coronavirus descriptions for Members and implementers. This is a full International Edition Release package containing changes to the content detailed in the news item (https://www.snomed.org/news-and-events/articles/changes-coronavirus-descriptions) under the following conditions:

- following SNOMED International's critical incident policy, there will NOT be a recall of the January release, simply an update in response to international renaming, to ensure that SNOMED CT is current when assisting with the global Coronavirus effort
- implementers are encouraged to update to the new edition, however, they are NOT obliged to do so as the concept modelling and identifiers are not being modified
- the entirety of these changes will also be incorporated into the upcoming July 2020 International Edition Release



New content added for 2019 novel coronavirus

A set of new components have been added and refined for the March 2020 release:

RF2 file

Number of Changes

Changes for this release

RF2 file

Number of Changes

Changes for this release

Description files

37

24 records added, with all 7 Coronavirus concepts having 3x records added each (1x FSN = 2x Synonyms) plus Core concept description added back in referencing March 2020:

ConceptID

DescriptionID

Term

840534001

3950925017

COVID-19 vaccination 

840544004

3950926016

Suspected COVID-19 

840535000

3947177019

Antibody to severe acute respiratory syndrome coronavirus 2 (substance) 

840535000

3947178012

Antibody to severe acute respiratory syndrome coronavirus 2 

840535000

3947179016

Antibody to SARS-CoV-2 

840536004

3947180018

Antigen of severe acute respiratory syndrome coronavirus 2 (substance) 

840536004

3947181019

Antigen of severe acute respiratory syndrome coronavirus 2 

840536004

3947182014

Antigen of SARS-CoV-2 

840539006

3947183016

Disease caused by severe acute respiratory syndrome coronavirus 2 (disorder) 

840539006

3947184010

Disease caused by severe acute respiratory syndrome coronavirus 2 

840539006

3947185011

COVID-19 

840546002

3947186012

Exposure to severe acute respiratory syndrome coronavirus 2 (event) 

840546002

3947187015

Exposure to SARS-CoV-2 

840546002

3947188013

Exposure to severe acute respiratory syndrome coronavirus 2 

840533007

3947189017

Severe acute respiratory syndrome coronavirus 2 (organism) 

840533007

3947190014

SARS-CoV-2 

840533007

3947191013

Severe acute respiratory syndrome coronavirus 2 

840534001

3947192018

Severe acute respiratory syndrome coronavirus 2 vaccination (procedure) 

840534001

3947193011

SARS-CoV-2 vaccination 

840534001

3947194017

Severe acute respiratory syndrome coronavirus 2 vaccination 

840544004

3947195016

Suspected disease caused by SARS-CoV-2 

840544004

3947196015

Suspected disease caused by severe acute respiratory coronavirus 2 

840544004

3947197012

Suspected disease caused by severe acute respiratory coronavirus 2 (situation) 

138875005

3947198019

SNOMED Clinical Terms version: 20200309 [R] (March 2020 Interim Release) 



Plus 15 records inactivated, with all 7 Coronavirus concepts having 1 description inactivated each, plus the 1 Core concept description record inactivated as still referencing January 2020.



Language refset files

88

16 records updated, with all 16 language refset records from January 2020 being changed from Preferred to Acceptable as part of these changes.

Plus 30 records inactivated, due to the inactivation of both language refset records for all 7 original concepts created in January 2020, plus the inactivation of the original January 2020 Core description.

Plus 48 records added, with both Language records (EN-GB + EN-US) for each of the 24 new Descriptions above.

Attribute Value files

15

15 records added, due to the inactivations of the descriptions (above).

ExtendedMap files

3

3 records added, due to the ICD-10 map records added for the new Coronavirus content.

ModuleDependency files

3

3 records updated, as expected for March 2020 effectiveTimes

Readme file



March 2020 dates updated + Coronavirus explanations added, as expected

Concept files

0

No changes required

Relationship files

0

No changes required



OwlExpression files

0

No changes required



Stated Relationship files

0

No changes required



TextDefinition files

0

No changes required



SimpleMap files

0

No changes required



Simple Refset files

0

No changes required



MRCM AttributeDomain files

0

No changes required



MRCM AttributeRange files

0

No changes required

MRCM Domain files

0

No changes required

Association Reference files

0

No changes required



SNOMED CT derived products

ICD-10 map

The SNOMED CT to the International Statistical Classification of Diseases and Related Health Problems, Tenth Revision (© World Health organisation 1994) 2016 Version map (SNOMED CT to ICD-10 Map) is included in the SNOMED CT International release as a Baseline. The SNOMED CT to ICD-10 Map was created to support the epidemiological, statistical and administrative reporting needs of SNOMED International member countries and WHO Collaborating Centres.

The SNOMED CT to ICD-10 Map is released in Release Format 2 (RF2) only. It is located in the file der2_iisssccRefset_ExtendedMapFull_INT_20200309.txt, which is in the Map folder under Refset, in each of the three RF2 Release Type folders. 

The SNOMED CT to ICD-10 Map is released as Refset 447562003 |ICD-10 complex map reference set (foundation metadata concept)|.

Content development activity summary

The map is a directed set of relationships from SNOMED CT source concepts to ICD-10 target classification codes.  The SNOMED CT source domains for the MAP are limited to subtypes of 404684003 |clinical finding|, 272379006 |event| and 243796009 |situation with explicit context|.  The target classification codes are ICD-10 2016 release. 

Mapped content for March 2020

The map provided for the March 2020 release has been updated in line with the Coronavirus changes for both the January 2020 and March 2020 International Edition releases:

referencedComponentId

mapAdvice

mapTarget

correlationId

mapCategoryId

referencedComponentId

mapAdvice

mapTarget

correlationId

mapCategoryId

840539006

ALWAYS U07.1 | POSSIBLE REQUIREMENT FOR ADDITIONAL CODE TO FULLY DESCRIBE DISEASE OR CONDITION

U07.1 

447561005

447637006

840546002

ALWAYS Z20.8 

Z20.8

447561005

447637006

840544004

MAP SOURCE CONCEPT CANNOT BE CLASSIFIED WITH AVAILABLE DATA

-

447561005

447638001



We would welcome feedback on any issues that users of the map may detect when using the map. Issues should be submitted via mapping@snomed.org

Technical Guide Exemplars

The Technical Guide Exemplars document has now been moved from the International Edition release package to a Confluence page.  This page can be found as part of the ICD-10 Mapping Technical Guide (see Appendix B), which is hosted here:  http://snomed.org/icd10map

ICD-O Map

No changes to the ICD-0 map were required for this Interim release.



SNOMED CT to OWL conversion and classification

The repository containing the toolkit enabling simple SNOMED CT to OWL conversion and classification can be found here, including documentation on its use: https://github.com/IHTSDO/snomed-owl-toolkit

Please contact SNOMED International at support@snomed.org if you would like to provide any feedback on ways to extend and improve the new toolkit.



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